G. Elisabeta Marai

EVL Faculty
Associate Professor, Computer Science
gmarai@uic.edu

Bibliography

Luciani, T., Burks, A., Sugiyama, C., Komperda, J., Marai, G.E., Details-First, Show Context, Overview Last: Supporting Exploration of Viscous Fingers in Large-Scale Ensemble Simulations, IEEE Transactions on Visualization and Computer Graphics (Proceedings of the Visual Analytics Science and Technology / Information Visualization / Scientific Visualization 2018), vol 25, no 1, pp. 1-11, January 1, 2019

Marai, G.E., Ma, C., Burks, A., Pellolio, F., Canahuate, G., Vock, D., Mohamed, A.S.R., Fuller, C.D., Precision Risk Analysis of Cancer Therapy with Interactive Nomograms and Survival Plots, IEEE Transactions on Visualization and Computer Graphics, vol 14, pp. 1-13, August 1, 2018

, Frontiers in Oncology 2018, vol 8, pp. 1-14, July 1, 2018

Elhalawani, H., Mohamed, A., Volpe, V., Yang, P., Campbell, S., Granberry, R., Ger, R., Fave, X., Zhang, L., Marai, GE, Vock, DM, Canahuate, GM, Macking, D., Court, L., Gunn, GB, Rao, A., Fuller, CD, A Composite Clinical/Serially-derived Parotid Gland Radiomics-based Model can be Correlated with Post-RT Xerostomia at 6 months in Oropharyngeal Cancer Patients Treated with Image-Guided Radiation Therapy, ESTRO 2018, pp. 1-3, April 20, 2018

Elhalawani, H., Mohamed, A., Volpe, V., Yang, P., Campbell, S., Granberry, R., Ger, R., Fave, X., Zhang, L., Marai, GE, Vock, DM, Canahuate, GM, Macking, D., Court, L., Gunn, GB, Rao, A., Fuller, CD, A Combination of Serial Tumor Radiomics Features and key clinical attributes can predict the response of Head & Neck Cancers Treated with Image-Guided Radiation Therapy, ESTRO 2018, pp. 1-3, April 20, 2018

AboHashem, S., Aymard, J., Berends, J., Campbell, S., Canahuate, G., Cooksey, L., Ding, Y., Elhalawani, H., Freymann, JFarahani, K., Fuller, C.D, Kanwar, A., Kalpathy-Cramer, J., Lai, S., Marai, G.E., Mohamed, A.S.R., Ng, S.P., Perni, S., Rock, C., Vock , D., White, A., Investigation of radiomics-based signature for local recurrence using primary tumor texture analysis in oropharyngeal head and neck cancer patients, Nature Scientific Reports 8: 1524, January 24, 2018

Marai, G.E., Activity-Centered Domain Characterization for Problem-Driven Scientific Visualization, IEEE Transactions on Visualization and Computer Graphics, vol 24, January 1, 2018

Elhalawani, H., Mohamed, A., Volpe, V., Yang, P., Campbell, S., Granberry, R., Ger, R., Fave, X., Zhang, L., Marai, GE, Vock, DM, Canahuate, GM, Macking, D., Court, L., Gunn, GB, Rao, A., Fuller, CD, Normal Tissue Radiomic Feature Kinetics in Oropharygeal Cancers Treated with Image-Guided Radiation Therapy: Assessment of Parotid Glands Textural Changes on Daily Non-contrast CT, RSNA 2017, Scientific Reports, November 26, 2017

Elhalawani, H., Mohamed, A., Volpe, V., Yang, P., Campbell, S., Granberry, R., Ger, R., Fave, X., Zhang, L., Marai, GE, Vock, DM, Canahuate, GM, Macking, D., Court, L., Gunn, GB, Rao, A., Fuller, CD, Predicting the HPV P16 Status of Oropharyngeal Cancer Patients Using Radiomics and an Ensemble of Random Forests, Radiology Society of North America meeting RSNA 2017, November 26, 2017

Ma, C., Pellolio, F., Llano, D., Stebbings, K.A., Kenyon, R.V., Marai, G.E., RemBrain: Exploring Dynamic Biospatial Networks with MosaicMatrices and Mirror Glyphs, Journal of Imaging Science and Technology, November 1, 2017

Ma, C., Luciani, T., Terebus, A., Liang, J., Marai, G.E., PRODIGEN: visualizing the probability landscape of stochastic gene regulatory networks in state and time space, 6th Symposium on Biological Data Visualization, Baltimore, MD, BMC Bioinformatics 18(2):24, 2017, pp. 1-13, October 24, 2017

Thomas, M., Kanampallil, T., Abraham, J., Marai, G.E., Echo: A Large Display Interactive Visualization of ICU Data for Effective Care Handoffs, IEEE 8th Workshop on Visual Analytics in Health Care VAHC’17, Phoenix, AZ, pp. 1-8, October 2, 2017

Castor, J., Borowicz, J., Burks, A., Thomas, M., Luciani, T., Marai, G.E., MC2 - Mining Factory Pollution Data through a Spatial-Nonspatial Flow Approach, IEEE Visual Analytics Science and Technology (VAST) Challenge 2017 Proceedings, Phoenix, AZ, pp. 1-2, October 1, 2017

Mahida, V., Kupiec, B., Burks, A., Luciani, T., Marai, G.E., MC3 - A Web-Based Interactive Image Explorer for Temporal Analysis of Satellite Images, IEEE Visual Analytics Science and Technology (VAST) Challenge 2017 Proceedings, Phoenix, AZ, pp. 1-2, October 1, 2017

Kirilov, D., Lindmae, I., Burks, A., Ma, C., Marai, G.E., MC1: A Bespoke Analysis Tool for Spatio-temporal Park Traffic Data, IEEE Visual Analytics Science and Technology (VAST) Challenge 2017 Proceedings, Phoenix, AZ, pp. 1-2, October 1, 2017

Ma, C., Burks, A., Luciani, T.Terebus, A., Liang, J., Marai, G.E., Visualizing ensemble time-evolving probability landscapes of stochastic networks, ISMB/ECCB 2017, BioVis'17, Phoenix, AZ, pp. 1-2, September 29, 2017

Monfort, M., Luciani, T., Komperda, J., Ziebart, B., Mashayek, F., Marai, G.E., A Deep Learning Approach to Identifying Shock Locations in Turbulent Combustion Tensor Fields, Modelling, Processing and Visualization of Anisotropy, Mathematics and Visualization Series, Springer, Cham, pp. pp 375-392, I. Hotz, T. Schultz, E. Ozarslan (eds), July 8, 2017

Elhalawani,H., Mohamed,A., White,A., Zafereo,J., Wong, A., Berends,J., AboHashem,S., Williams,B., Aymard, J., Kanwar,A., Perni,S., Rock,C., Cooksey,L., Campbell,S., Ding, Y., Lai,S., Marai,L., Vock,D., Canahuate,G., Freymann,J., Farahani,K., Kalpathy-Cramer,J., Fuller, D., Matched computed tomography segmentation and demographic data for oropharyngeal cancer radiomics challenges, Nature Scientific Data 4 : 170077 | DOI: 10 . 1038 /sdata. 2017 . 77, July 4, 2017

Doshi, V., Tuteja, S., Bharadwaj, K., Tantillo, D., Marrinan, T., Patton, J., Marai, G.E., StickySchedule: An Interactive Multi-user Application for Conference Scheduling on Large-scale Shared Displays, Proceedings of the 6th ACM International Symposium on Pervasive Displays (PerDis ’17), Lugano, Switzerland, June 7, 2017

Beadle, B., Canahuate, G., El-Naggar, A., Frank, S., Fuller, D., Garden, A., Gross, N., Gunn, G.B., Hutcheson, K., Lai, S., Lewin, J., Kies, M., Marai, G.E., Mohamed, A., Morrison, W., Mulcahy, C., Phan, J., Rosenthal, D., Sevak, P,, Sheu, T., Vock, D., Weber, R., Zafereo, M., Conditional Survival Analysis of Patients With Locally Advanced Laryngeal Cancer: Construction of a Dynamic Risk Model and Clinical Nomogram, Nature Scientific Reports 7, Article 43928, March 9, 2017

Kitsiou, S., Thomas, M., Marai, G.E., Maglaveras, N., Kondos, G., Arena, R., Gerber, B., Development of an innovative mHealth platform for remote physical activity monitoring and health coaching of cardiac rehabilitation patients, IEEE International Conference on Biomedical and Health Informatics, Orlando, FL, February 16, 2017

Kanwar, A., Mohamed, A., Court, L., Zhang, L., Marai, G.E, Canahuate, G., Lee, J.Perni, A., Messer, J., Pham, B., Youssef, B., Vock, D., Rao, A., Kalpathy-Cramer, J., Gunn, G., Rosenthal, D., Fuller, D., Development of a Predictive Quantitative Contrast Computed Tomography-Based Feature (Radiomics) Profile for Local Recurrence in Oropharyngeal Cancers, International Journal of Radiation Oncology, Biology, Physics 96(2):S191, vol 96, no 2, pp. S191, October 1, 2016

Bharadwaj, K., Flores, S., Rodriguez, J., Long, L., Marai, G. E., Developing a Scalable SNMP Monitor, IEEE International Parallel and Distributed Processing Symposium, Chicago, IL, pp. 1043-1047, May 23, 2016

Marai, G.E., Forbes, A., Johnson, A., Interdisciplinary Immersive Analytics at the Electronic Visualization Laboratory: Lessons Learned and Upcoming Challenges, IEEE VR 2016 Immersive Analytics Workshop, Greenville, SC, March 19, 2016

Marai, G. E., Luciani, T., Maries, A., Yilmaz, S. L., Nik, M. B., Visual Descriptors for Dense Tensor Fields in Computational Turbulent Combustion: A Case Study, Journal of Imaging Science and Technology, vol 60, no 1, January 1, 2016

Aurisano, J., Reda, K., Johnson, A., Marai, G.E., Leigh, J., BactoGeNIE: A Large-Scale Comparative Genome Visualization for Big Displays, BioVis2015, BMC Bioinformatics Journal, Dublin, Ireland, August 1, 2015

Marai, G.E., Visual Scaffolding in Integrated Spatial and Nonspatial Analysis, Proceedings of EuroVis Workshop on Visual Analytics (2015), Cagliari, Italy, E. Bertini, J. C. Roberts, May 25, 2015

Maries, A., Luciani, T., Pisciuneri, P.H., Nik, M.B., Yilmaz, S.L., Givi, P,, Marai, G.E., Clustering Method for Identifying Regions of Interest in Turbulent Combustion Tensor Fields, Visualization and Processing of Higher Order Descriptors for Multi-Valued Data, Springer, pp. 1-18, Ingrid Hotz, Thomas Schultz, February 1, 2015

Luciani, T., Wenskovitch, J., Chen, K., Koes, D., Travers, T., Marai, G.E., FixingTIM: Interactive Exploration of Sequence and Structural Data to Identify Functional Mutations in Protein Families, BMC Proceedings 2014, vol 8, 8(Suppl 2):S3, pp. 1-0, August 1, 2014

Luciani, T., Cherinka, B., Oliphant, D., Myers, S., Wood-Vasey, W. M., Labrinidis, A., Marai, G. E., Large-Scale Overlays and Trends: Visually Mining, Panning and Zooming the Observable Universe, IEEE Transactions on Visualization and Computer Graphics, no 7, pp. 1-14, July 1, 2014

Wenskovitch, J., Harris, L.A., Tapia, J.J, Faeder, J.R., Marai, G.E., MOSBIE: A Tool for Comparison and Analysis of Rule-Based Biochemical Models, January 1, 2014

Hlawitschka, M., Hotz, I., Kratz, A., Marai, G.E., Moreno, R., Scheuermann, G., Stommel, M., Wiebel, A., Zhang, E., Top Challenges in the Visualization of Engineering Tensor Fields, Visualization and Processing of Tensors and Higher-Order Descriptors for Multi-field Data, Springer, pp. 1-13, Westin, C.F.|Burgeth, B.|Vilanova, A. (editors), January 1, 2014

Luciani, T., Maries, A., Nik, M., Yilmaz,S. L., Marai, G. E., Visualization of Tensor Quantities Used in Computational Turbulent Combustion, 66th Annual Meeting of the APS Division of Fluid Dynamics, pp. 1-1, November 24, 2013

Wenskovitch, J., Luciani, T., Chen, K., Marai. G. E., Fixing TIM: Identifying Functional Mutations in Protein Families through the Interactive Exploration of Sequence and Structural Data, IEEE BioVis 2013 Data Competition, pp. 1-4, October 13, 2013

Maries, A., Mays, N., Olson Hunt, M., Wong, K., Layton, W., Rosano, C., Boudreau, R., Marai, G.E., GRACE: A Visual Comparison Framework for Integrated Spatial and Non-Spatial Geriatric Data, IEEE Transactions on Visualization and Computer Graphics, vol 19, no 12, pp. 2916-2925, October 1, 2013

Luciani, T., Maries, A., Tran, H., Nik, M., Yilmaz, S. L., Marai, G. E., A Novel Method for Tracking Tensor-based Regions of Interest in Large-Scale, Spatially-Dense Turbulent Combustion Data, IEEE Visualization 2012 Poster Abstracts with System Demonstration, pp. 1-2, October 1, 2012

Neophytou, P., Gheorghiu, R., Hachey, R., Luciani, T., Sun, B., Labrinidis, A., Marai, G. E., Chrysanthis, P. K., AstroShelf: Understanding the Universe Through Scalable Navigation of a Galaxy of Annotations, SIGMOD 2012 System Demonstrations Compendium, Scottsdale, AZ, pp. 1-4, May 20, 2012

Luciani, T., Cherinka, B., Myers, S., Sun, B., Wood-Vassey, W. M., Labrinidis, A., Marai, G. E., Panning and Zooming the Observable Universe with Prefix-Matching Indices and Pixel-Based Overlays, IEEE Visualization 2012, Large-Scale Data Analysis and Visualization Symposium, Seattle, WA, pp. 1-8, April 14, 2012

Maries, A., Haque, M. A., Yilmaz, S. L., Nik, M. B., Marai, G. E., Interactive Exploration of Stress Tensors Used in Computational Turbulent Combustion, New Developments in the Visualization and Processing of Tensor Fields, Springer, pp. 137-156, D. Laidlaw, A. Villanova (editors), January 1, 2012

Luciani, T., Hachey, R., Oliphant, D. Q., Cherinka, B. A., Marai, G. E., Pixel-based Overlays for Navigating a Galaxy of Observations, IEEE Visualization 2011, Large-Scale Data Analysis and Visualization Symposium, Poster Abstracts with System Demonstration, Providence, RI, pp. 1-2, October 23, 2011

Haque, M. A., Maries, A., Yilmaz, S. L., Nik, M. B., Marai, G. E., Tensor Visualization in Computational Turbulent Combustion: A Case Study, IEEE Visualization 2010, Poster Abstracts with System Demonstration, pp. 1-2, October 1, 2010