Scalable parallel I/O on a Blue Gene/Q supercomputer using compression, topology-aware data aggregation, and subfiling

February 12th, 2014

Categories: Software, Supercomputing, Visualization

IBM Blue Gene/Q at Argonne National Laboratory
IBM Blue Gene/Q at Argonne National Laboratory

Authors

Bui, H., Leigh, J., Vishwanath, V., Finkel, H., Habib, S., Heitmann, K., Papka, M., Harms, K.

About

In this paper, we propose an approach to improving the I/O performance of an IBM Blue Gene/Q supercomputing system using a novel framework that can be integrated into high performance applications. We take advantage of the systems’ tremendous computing resources and high interconnection bandwidth among compute nodes to efficiently exploit I/O bandwidth. This approach focuses on loss-less data compression, topology-aware data movement, and subfiling. The efficacy of this solution is demonstrated using micro-benchmarks and an application-level benchmark.

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Citation

Bui, H., Leigh, J., Vishwanath, V., Finkel, H., Habib, S., Heitmann, K., Papka, M., Harms, K., Scalable parallel I/O on a Blue Gene/Q supercomputer using compression, topology-aware data aggregation, and subfiling, Proceedings of the 22nd Euromicro International Conference on Parallel, networked-based Processing (PDP 2014), Turin, Italy, February 12th, 2014.